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. 2016 Mar 1;113(9):2442-7.
doi: 10.1073/pnas.1517943113. Epub 2016 Jan 19.

Delayed fungal evolution did not cause the Paleozoic peak in coal production

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Delayed fungal evolution did not cause the Paleozoic peak in coal production

Matthew P Nelsen et al. Proc Natl Acad Sci U S A. .

Abstract

Organic carbon burial plays a critical role in Earth systems, influencing atmospheric O2 and CO2 concentrations and, thereby, climate. The Carboniferous Period of the Paleozoic is so named for massive, widespread coal deposits. A widely accepted explanation for this peak in coal production is a temporal lag between the evolution of abundant lignin production in woody plants and the subsequent evolution of lignin-degrading Agaricomycetes fungi, resulting in a period when vast amounts of lignin-rich plant material accumulated. Here, we reject this evolutionary lag hypothesis, based on assessment of phylogenomic, geochemical, paleontological, and stratigraphic evidence. Lignin-degrading Agaricomycetes may have been present before the Carboniferous, and lignin degradation was likely never restricted to them and their class II peroxidases, because lignin modification is known to occur via other enzymatic mechanisms in other fungal and bacterial lineages. Furthermore, a large proportion of Carboniferous coal horizons are dominated by unlignified lycopsid periderm with equivalent coal accumulation rates continuing through several transitions between floral dominance by lignin-poor lycopsids and lignin-rich tree ferns and seed plants. Thus, biochemical composition had little relevance to coal accumulation. Throughout the fossil record, evidence of decay is pervasive in all organic matter exposed subaerially during deposition, and high coal accumulation rates have continued to the present wherever environmental conditions permit. Rather than a consequence of a temporal decoupling of evolutionary innovations between fungi and plants, Paleozoic coal abundance was likely the result of a unique combination of everwet tropical conditions and extensive depositional systems during the assembly of Pangea.

Keywords: carbon cycle; fungi; lignin; lignin degradation; wood rot.

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Conflict of interest statement

The authors declare no conflict of interest.

Figures

Fig. 1.
Fig. 1.
Terrestrial, North American organic sediment (coal, peat, lignite, anthracite, and tar) accumulation through time. Data are from the Macrostrat database, and age estimates are derived from a continuous time age model. Sedimentation metrics include (A) total packages, i.e., the number of organic-rich sedimentary successions per million years, and (B) organic-rich sediment volume burial flux measured in cubic kilometers per million years (derived from stratigraphic thickness, depositional area, and deposition duration). The light-colored section under the curve indicates the time interval over which lycopsids played a dominant role in North American wetlands. Thus, lignin would have been of secondary importance during this period, aside from in a few interspersed floral assemblages in which woody cordaitalean seed plants with higher lignin contents were codominant. Consequently, lignin is expected to have been a greater contribution to coal formation both before and after this interval of lycopsid dominance. Coal production being the result of a temporal lag between the evolution of lignin synthesis by plants and lignin decay by fungi is inconsistent with (i) the lack of correspondence between coal production rates and transitions in biochemical inputs, (ii) the sharp, short-lived peaks in Carboniferous coal production, and (iii) the return to high levels of coal production in the last 100 million years.
Fig. 2.
Fig. 2.
Modern white rot, and Upper Devonian fossil specimens of Callixylon newberryi wood containing fungal hyphae or exhibiting patterns consistent with fungal decay. (A) Modern wood exhibiting macroscopic white rot decay pattern with patches of degraded tissue. (Scale bar, 5 mm.) (B) Acetate peel of C. newberryi illustrating extensive macroscopic decay consistent with fungal decay to the left of the arrow. Specimen from Kettle Point, Ontario, United States National Museum number 618400. (Scale bar, 1 cm.) (C) Longitudinal thin section of C. newberryi wood and associated fungal hyphae previously described and recognized as consistent with white rot decay, although without documentation of clamp connections necessary for placement in Basidiomycota (77, 138). Specimen is from the New Albany Shale of Indiana, University of Michigan Museum of Paleontology Paleobotany number 13834. (Scale bar, 25 µm.)

Comment in

  • A Late Paleozoic climate window of opportunity.
    Montañez IP. Montañez IP. Proc Natl Acad Sci U S A. 2016 Mar 1;113(9):2334-6. doi: 10.1073/pnas.1600236113. Epub 2016 Feb 16. Proc Natl Acad Sci U S A. 2016. PMID: 26884174 Free PMC article. No abstract available.

References

    1. Flores RM. Coal and Coalbed Gas: Fueling the Future. 1st Ed Elsevier; Amsterdam: 2013.
    1. Thomas L. Coal Geology. 2nd Ed Wiley-Blackwell; Chichester, UK: 2013.
    1. Schopf JM. A definition of coal. Econ Geol. 1956;51(6):521–527.
    1. Moore PD. The ecology of peat-forming processes: A review. Int J Coal Geol. 1989;12(1):89–103.
    1. Hatcher PG, Clifford DJ. The organic geochemistry of coal: From plant materials to coal. Org Geochem. 1997;27(5-6):251–274.

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