Statistics about the current Human GENCODE Release (version 27)
* The statistics derive from the gtf file that contains only the annotation of the main chromosomes.
For details about the calculation of these statistics please see the README_stats.txt file.
Compare with the previous release (GENCODE 26) »
Version 27 (January 2017 freeze, GRCh38) - Ensembl 90, 91
General stats
- Total No of Genes
- 58288
- Protein-coding genes
- 19836
- Long non-coding RNA genes
- 15778
- Small non-coding RNA genes
- 7569
- Pseudogenes
- 14694
- - processed pseudogenes:
- 10704
- - unprocessed pseudogenes:
- 3469
- - unitary pseudogenes:
- 206
- - polymorphic pseudogenes:
- 63
- - pseudogenes:
- 18
- Immunoglobulin/T-cell receptor gene segments
- - protein coding segments:
- 410
- - pseudogenes:
- 234
- Total No of Transcripts
- 200401
- Protein-coding transcripts
- 80930
- - full length protein-coding:
- 55406
- - partial length protein-coding:
- 25524
- Nonsense mediated decay transcripts
- 14208
- Long non-coding RNA loci transcripts
- 27908
-
- Total No of distinct translations
- 60297
- Genes that have more than one distinct translations
- 13580
Further details on this version's gene and transcript types
| biotype | genes | transcripts |
|---|---|---|
| 3prime_overlapping_ncRNA | 31 | 35 |
| antisense_RNA | 5521 | 11050 |
| bidirectional_promoter_lncRNA | 19 | 40 |
| IG_C_gene | 14 | 23 |
| IG_C_pseudogene | 9 | 9 |
| IG_D_gene | 37 | 37 |
| IG_J_gene | 18 | 18 |
| IG_J_pseudogene | 3 | 3 |
| IG_pseudogene | 1 | 1 |
| IG_V_gene | 144 | 144 |
| IG_V_pseudogene | 188 | 188 |
| lincRNA | 7499 | 13348 |
| macro_lncRNA | 1 | 1 |
| miRNA | 1881 | 1881 |
| misc_RNA | 2213 | 2227 |
| Mt_rRNA | 2 | 2 |
| Mt_tRNA | 22 | 22 |
| non_coding | 3 | 3 |
| non_stop_decay | 0 | 84 |
| nonsense_mediated_decay | 0 | 14208 |
| polymorphic_pseudogene | 63 | 89 |
| processed_pseudogene | 10240 | 10243 |
| processed_transcript | 544 | 28230 |
| protein_coding | 19836 | 80930 |
| pseudogene | 18 | 37 |
| retained_intron | 0 | 27239 |
| ribozyme | 8 | 8 |
| rRNA | 544 | 544 |
| scaRNA | 49 | 49 |
| scRNA | 1 | 1 |
| sense_intronic | 905 | 963 |
| sense_overlapping | 189 | 339 |
| snoRNA | 943 | 955 |
| snRNA | 1900 | 1900 |
| sRNA | 5 | 5 |
| TEC | 1066 | 1165 |
| TR_C_gene | 6 | 6 |
| TR_D_gene | 4 | 4 |
| TR_J_gene | 79 | 79 |
| TR_J_pseudogene | 4 | 4 |
| TR_V_gene | 108 | 108 |
| TR_V_pseudogene | 30 | 30 |
| transcribed_processed_pseudogene | 462 | 462 |
| transcribed_unitary_pseudogene | 111 | 113 |
| transcribed_unprocessed_pseudogene | 830 | 836 |
| translated_processed_pseudogene | 2 | 2 |
| unitary_pseudogene | 95 | 95 |
| unprocessed_pseudogene | 2639 | 2640 |
| vaultRNA | 1 | 1 |
